Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015839590.1_cds_XP_016507333.1_20468
CDS Infomation

[gene=LOC107825018] [db_xref=GeneID:107825018] [protein=5-epiaristolochene 1,3-dihydroxylase-like isoform X2] [protein_id=XP_016507333.1] [location=complement(join(18240..18247,19959..20532,20687..21580))] [gbkey=CDS]
Sequence

ATGGAATTCTTCAGCTTGGTTTCCATATTCCTATTTCTATCTTTCCTCTTTTTGTTAAGG
AAATGTAAGAACTCCAATAGCCAAACCAAACAATTGCCTCCAGGTCCATGGAAAATACCA
ATACTAGGAAGTATGCTTCATATGCTTGGTGGAGAACCACACCATATCCTTAGGGATTTA
GCCAAAAAATATGGACCAATTATGCACCTTCAGTTTGGTGAAATTTCTGCAGTTGTGGTT
ACTTCTAGGGAGATGGCAAAAGAAGTGCTAAAAACTCATGACGTAGTTTTTGCATCTAGG
CCTAAAATTTTGGCCATGGACATTATCTGTTATAACCAGTCTGATATCGCCTTTAGCCCT
TATGGCGATCACTGGAGACAAATGCGTAAAATTTGTGTCATGGAACTTCTTAATGCAAAG
AATGTTCGGTCTTTCAGCTCGATCAGACGTGATGAAGTCGTTCGTCTCATTGACTCTATT
CGATCAGATTCTTCTTCTGGTGAGCTAGTTAATTTTACGCAAAGGATCATTTGGTTCGCG
AGCTCCATGACGTGTAGATCAGCATTTGGGCAAGTACTCAAGGGGCAAGACGTATTTGCC
AAAAAGATTAGAGAAGTAATAGGGTTAGCAGAAGGCTTTGATGTGGCCGATATCTTCCCT
TCATACAAGTTTCTTCATGTTCTCAGTGGAATGAAGCGTAAACTTCTGAATGCCCACCTT
AAGGTAGATGCCATTGTTGAAGATGTCATCAACGAGCACAAGAAAAATCTTGCAACTGGG
AAAACTAATGGAGCATTAGGAGGTGAAGATTTAATTGATGTCCTACTACGACTTATGAAT
GATACAAGTCTTCAATTTCCCATCACCAATGACAAAATCAAAGCTGTTATTGTTGACATG
TTTGCTGCCGGAACAGAAACTTCATCAACAACAACTGTATGGGCTATGGCTGAAATGATG
AAGAATCCAAATGTATTCAACAAAGCTCAAGCAGAAGTGAGAGAAACCTTTAAAGACAAA
GTAACATTTGATGAAATTGATGCAGAGGAGCTGGAATACTTAAAGTTAGTTATTAAAGAA
ACTTTGAGACTTCATCCACCGTCTCCACTTTTGGTCCCAAGAGAATGTAGGGAAGATACA
GATATTAACGGCTACACTATTCCTGCGAAGACCAAAGTTATGGTTAATGTTTGGGCATTG
GGAAGAGATCCAAAATATTGGGATGACGCAGAAAGCTTTAAGCCAGAGAGATTTGAGCAA
TGCTCTGTGGATTTTTTTGGTAATAATTTTGAGTTTCTTCCCTTTGGCGGTGGACGGAGA
ATATGTCCTGGTATGTCATTTGGTTTAGCTAATCTTTACTTGCCATTGGCTCAATTGCTA
TATCACTTTGATTGGAAACTCCCGAGCGGAATGATGCCCGGAGACTTGGACTTGACTGAA
TTAGCTGGAATAACAATTGCTAGAAAAGGTTTGTAG

Peptide Sequence

PEP ID

XP_016507333.1
PEP Infomation

PREDICTED: 5-epiaristolochene 1,3-dihydroxylase-like isoform X2 [Nicotiana tabacum]
Sequence

MEFFSLVSIFLFLSFLFLLRKCKNSNSQTKQLPPGPWKIPILGSMLHMLGGEPHHILRDL
AKKYGPIMHLQFGEISAVVVTSREMAKEVLKTHDVVFASRPKILAMDIICYNQSDIAFSP
YGDHWRQMRKICVMELLNAKNVRSFSSIRRDEVVRLIDSIRSDSSSGELVNFTQRIIWFA
SSMTCRSAFGQVLKGQDVFAKKIREVIGLAEGFDVADIFPSYKFLHVLSGMKRKLLNAHL
KVDAIVEDVINEHKKNLATGKTNGALGGEDLIDVLLRLMNDTSLQFPITNDKIKAVIVDM
FAAGTETSSTTTVWAMAEMMKNPNVFNKAQAEVRETFKDKVTFDEIDAEELEYLKLVIKE
TLRLHPPSPLLVPRECREDTDINGYTIPAKTKVMVNVWALGRDPKYWDDAESFKPERFEQ
CSVDFFGNNFEFLPFGGGRRICPGMSFGLANLYLPLAQLLYHFDWKLPSGMMPGDLDLTE
LAGITIARKGL

Transcript Sequence

Gene sequence data has not been registered.